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NAR Genomics & BioinformaticsDecember 2024John T Chamberlin, et al. Improved characterization of 3′ single-cell RNA-seq libraries with paired-end avidity sequencing
Comparison of 3' scRNAseq using standard 90bp single end method to paired end reads through exending R1 through poly-A tail. Illumina data was generated on the NovaSeq6000 for 5 libraries generated from 10x Chromium workflow and later sequenced on the AVITI platform using 2x150 chemistry
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Journal of Biological ChemistryOctober 2024Julia A. Jones, et al. Murine Nuclear Tyrosyl-tRNA Synthetase Deficiency Leads to Fat Storage Deficiency and Hearing Loss
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Molecular TherapyOctober 2024Devin J Jones, et al. Effective knockdown - replace gene therapy in a novel mouse model of DNM1 developmental and epileptic encephalopathy
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Current BiologySeptember 2024Panxin Du, et al. Genomic dynamics of the Lower Yellow River Valley since the Early Neolithic
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BioRxivSeptember 2024Rema Iyer, et al. SUMO2 Inhibition Reverses Aberrant Epigenetic Rewiring Driven by Synovial Sarcoma Fusion Oncoproteins and Impairs Sarcomagenesis
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BioRxivSeptember 2024Mira Mastoras, et al. Highly accurate assembly polishing with DeepPolisher
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Nature MethodsSeptember 2024Jouni Siren, et al. Personalized Pangenome References
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Nature CommunicationsSeptember 2024Braden T. Tierney, et al. Towards geospatially-resolved public-health surveillance via wastewater sequencing
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Nature GeneticsSeptember 2024Junjie Zhu, et al. Custom microfluidic chip design enables cost-effective three-dimensional spatiotemporal transcriptomics with a wide field of view
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Cell ReportsSeptember 2024Christine Germeys, et al. Targeting EGLN2/PHD1 protects motor neurons and normalizes the astrocytic interferon response
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BMC GenomicsAugust 2024Silvia Liu, et al. Utility Analyses of AVITI Sequencing Chemistry
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MedRxivAugust 2024Armin Ahmadi, et al. Randomized Crossover Clinical Trial of Nicotinamide Riboside and Coenzyme Q10 on Metabolic Health and Mitochondrial Bioenergetics in CKD
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BioRxivAugust 2024Aaron P. Havas, et al. Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer
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BioinformaticsAugust 2024Aarushi Sehgal, et al. Genome-wide detection of somatic mosaicism at short tandem repeats
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Science ImmunologyAugust 2024Leandro P Araujo, et al. Context-dependent role of group 3 innate lymphoidcells in mucosal protection
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Human Molecular GeneticsJuly 2024Orangel J Gutierrez Fugon, et al. Integration of CTCF Loops, Methylome, and Transcriptome in Differentiating LUHMES as a Model for Imprinting Dynamics of the 15q11-q13 Locus in Human Neurons
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BioRxivJuly 2024Erica M. Periandri, et al. Acetate enhances spatial memory in females via sex- and brain region-specific epigenetic and transcriptional remodeling
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Environmental MicrobiomeJuly 2024Brett Hale, et al. Fine-scale characterization of the soybean rhizosphere microbiome via synthetic long reads and avidity sequencing
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BioRxivJuly 2024Yick Hin Ling, et al. Live-cell single-molecule dynamics of eukaryotic RNA polymerase machineries
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BioRxivJuly 2024Maya Emmons-Bell, et al. Polyamines regulate cell fate by altering the activity of histone-modifying enzymes
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Nature CommunicationsJune 2024Changxu Fan, et al. Cis-regulatory evolution of the recently expanded Ly49 gene family
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HeliyonJune 2024Yagmur Azbazdar, et al. Interactions between genistein and Wnt pathway in colon adenocarcinoma and early embryos
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Nature MicrobiologyJune 2024Braden T. Tierney, et al. Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight
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BioRxivMay 2024Tina Truong, et al. The balance between antiviral and antibacterial responses during M. Tuberculosis infection is regulated by the ubiquitin ligase CBL
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BioRxivApril 2024Ross M Giglio, et al. A heterogenous pharmaco-transcriptomic landscape induced by targeting a single oncogenic kinase
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Nature MethodsApril 2024Patrick H Kennedy, et al. Post-translational modification-centric base editor screens to assess phosphorylation site functionality in high throughput
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151 - 175 of 191 publications