Publications Hub

Peer-reviewed and preprint publications demonstrating the real-world applications of our technology.

Nature BiotechnologyApril 2025David Porubsky, et al. Human de novo mutation rates from a four-generation pedigree reference
Using advanced sequencing technologies, the authors assembled near-complete genomes across four generations of the CEPH 1463 pedigree to investigate human de novo mutation (DNM) rates. AVITI sequencing provided high-accuracy data in homopolymer regions that improved validation of tandem repeat mutations and helped reduce artifacts in variant calling. Read our blog to learn more.
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BacteriophagesMay 2025Jonathan Shao, et al. Complete genome sequence of a Ralstonia-infecting jumbo phage isolated from Maryland, USA
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Animal MicrobiomeMay 2025Duan C. Copeland, et al. Honey bee (Apis mellifera) queen quality: host-microbial transcriptomes exploring the influence of age and hindgut symbiont Commensalibacter melissae
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BioRxivMay 2025Sebastian Hernandez, et al. Self-Organizing Neural Networks in Organoids Reveal Principles of Forebrain Circuit Assembly
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Environment InternationalMay 2025Mustafa Karatas, et al. Untapped Potential of Wastewater for Animal and Potentially Zoonotic Virus Surveillance: Pilot Study to Detect Non-Human Animal Viruses in Urban Settings
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AJHGMay 2025Michaela Bartusel, et al. A non-syndromic orofacial cleft risk locus links tRNA splicing defects to neural crest cell pathologies
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NeuronApril 2025Norjin Zolboot, et al. MicroRNA mechanisms instructing Purkinje cell specification
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BioRxivApril 2025Yawei Wu, et al. Long-range massively parallel reporter assay reveals rules of distal enhancer-promoter interactions
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ACS Infectious DiseaseApril 2025Akanksha Varshney, et al. A trans-Translation Inhibitor is Potentiated by Zinc and Kills Mycobacterium tuberculosis and Nontuberculous Mycobacteria
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BioRxivApril 2025Djuna von Maydell, et al. ABCA7 Loss-of-Function Variants Impact Phosphatidylcholine Metabolism in the Human Brain
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Archives of ToxicologyApril 2025Kelly E. Carstens, et al. Application of a high-density microelectrode array assay using a 3D human iPSC-derived brain microphysiological system model for in vitro neurotoxicity screening of environmental compounds
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BioRxivApril 2025Stephanie A. Gaglione, et al. Scalable TCR synthesis and screening enables antigen reactivity mapping in vitiligo
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BioRxivApril 2025Van-Hung Bui, et al. Single cell omics extends metabolic regulon via orthologous transcription factors from a pair of medicinal plant species
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Molecular CellApril 2025Sarah L. Breves, et al. Three-dimensional regulatory hubs support oncogenic programs in glioblastoma
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Cell ReportsApril 2025Seokwan Jo, et al. Placental Mitochondrial Calcium Uniporter Modulates Offspring Susceptibility to Obesity in a Sex-Dependent Manner
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Cellular SignalingApril 2025Ye Lu, et al. Deficiency of FUN14 domain-containing 1 enhances the migration and invasion of fibroblast-like synoviocytes in rheumatoid arthritis through mitochondrial dysregulation
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BioRxivApril 2025Junya Arai, et al. Muc6-expressing gastric isthmus progenitors contribute to regeneration and metaplasia supported by myeloid-mesenchymal interactions
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BioRxivApril 2025Klara Gawor, et al. Alzheimer’s disease and its co-pathologies: implications for hippocampal degeneration, cognitive decline, and the role of APOE ε4
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BioRxivApril 2025Andrew Lu, et al. Engineered protein circuits for cancer therapy
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BioRxivApril 2025Harry N White, et al. VH-replacement shapes the antibody repertoire by targeting non-pairing heavy-chains
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Scientific dataApril 2025Haomin Lyu, et al. Chromosome-level genome assembly and annotation of Anthurium amnicola
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BioRxivApril 2025Charles E. McAnany, et al. PISA: a versatile interpretation tool for visualizing cis-regulatory rules in genomic data
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BioRxivApril 2025Olivia S. Hazelwood, et al. Cell cycle follows pause and play mechanism in environment stress recovery in diverse plant species
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PNASApril 2025Stephane M Guillaume, et al. Lung B cells in ectopic germinal centers undergo affinity maturation
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BioRxivApril 2025Syeda Kubra, et al. The SET1/COMPASS subunit RBBP5 orchestrates epigenetic control of global proteostasis and the 12h oscillator to safeguard metabolic and cellular homeostasis
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G3March 2025Claire Paltenghi, et al. Genetic suppression interactions are highly conserved across genetic backgrounds
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51 - 75 of 200 publications